STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNLZDNL-type zinc finger. (109 aa)    
Predicted Functional Partners:
HSPA9
Heat shock 70kDa protein 9 (Mortalin), transcript variant X1; Belongs to the heat shock protein 70 family.
    
 
 0.846
CARD9
Caspase recruitment domain family, member 9.
 
    
 0.721
A306_00014782
Uncharacterized protein.
   
  
 0.577
TIMM44
Tim44 domain-containing protein.
   
  
 0.541
TIMM17A
Uncharacterized protein.
   
  
 0.538
CDPF1
Cysteine-rich, DPF motif domain containing 1, transcript variant X1.
      
 0.534
A306_00000364
Uncharacterized protein.
   
  
 0.531
A306_00013852
Uncharacterized protein.
   
  
 0.529
PIGN
Phosphatidylinositol glycan anchor biosynthesis, class N.
      
 0.526
COQ4
Coenzyme Q4.
      
 0.469
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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