STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYOTMyotilin, transcript variant X1. (517 aa)    
Predicted Functional Partners:
A306_00007267
Myopalladin-like.
 
      0.893
MYOZ1
Myozenin 1, transcript variant X1.
   
  
 0.612
PKD1
Polycystic kidney disease 1 (Autosomal dominant).
    
 0.549
PKDREJ
Polycystin (PKD) family receptor for egg jelly.
    
 0.549
PKD1L2
Polycystic kidney disease 1-like 2.
    
 
 0.544
EXOC5
Exocyst complex component 5, transcript variant X1.
     
 0.540
NEB
Nebulin.
   
  
 0.540
MYOZ2
Myozenin 2.
   
  
 0.464
SEC63
SEC63 homolog, protein translocation regulator.
    
 
 0.450
LDB3
LIM domain binding 3, transcript variant X1.
   
  
 0.422
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.