STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A306_00007566Synaptotagmin-like protein 2. (971 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
     
 0.686
RAB27B
RAB27B, member RAS oncogene family.
    
 
 0.632
RAB27A
RAB27A, member RAS oncogene family, transcript variant X1.
    
 
 0.632
RIMS2
Regulating synaptic membrane exocytosis 2.
     
0.615
CASK
Calcium/calmodulin-dependent serine protein kinase (MAGUK family), transcript variant X1; Belongs to the MAGUK family.
     
 0.496
ITSN1
Intersectin 1 (SH3 domain protein).
     
 0.471
A306_00007626
SLAIN motif-containing protein-like.
  
 
   0.462
LHFPL2
Lipoma HMGIC fusion partner-like 2.
   
 
 0.461
A306_00012539
Perilipin-3.
  
 
  0.414
CUNH1orf168
hSH3 domain-containing protein.
  
     0.401
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.