STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP12Ubiquitin specific peptidase 12; Belongs to the peptidase C19 family. (249 aa)    
Predicted Functional Partners:
WDR48
WD repeat domain 48.
   
 0.917
WDR20
WD repeat domain 20.
   
 0.897
RPS27A
Ribosomal protein S27a.
    
 0.686
FANCD2
Fanconi anemia, complementation group D2.
    
 0.592
FANCI
Fanconi anemia, complementation group I.
   
 0.565
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.553
FANCM
Fanconi anemia, complementation group M.
     
 0.546
A306_00014857
2'-5'-oligoadenylate synthase 1.
    
 0.523
ZFAND4
Zinc finger, AN1-type domain 4.
    
 0.523
AR
Androgen receptor.
    
  0.507
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.