STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LNX2Ligand of numb-protein X 2. (331 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin-dependent serine protein kinase (MAGUK family), transcript variant X1; Belongs to the MAGUK family.
   
 0.535
IFT57
Intraflagellar transport 57.
    
 0.530
IFT80
Intraflagellar transport 80.
    
 0.524
TRAF3IP1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.522
IFT172
Intraflagellar transport 172.
    
 0.518
PICK1
Protein interacting with PRKCA 1.
    
 0.508
IFT88
Intraflagellar transport 88.
    
 0.482
MPP3
Membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3); Belongs to the MAGUK family.
    
 0.464
RPS27A
Ribosomal protein S27a.
   
  0.464
MPP5
Membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5); Belongs to the MAGUK family.
    
 0.464
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.