STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A306_00004856Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles. (151 aa)    
Predicted Functional Partners:
NGB
Neuroglobin; Belongs to the globin family.
      
 0.738
ADGB
Androglobin; Belongs to the peptidase C2 family.
   
 
 0.730
A306_00000930
Cytochrome b5 reductase 4.
   
 0.658
GBE1
Glucan (1,4-alpha-), branching enzyme 1.
      
 0.561
ODC1
Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
      
 0.548
A306_00009634
Metallothionein; Metallothioneins have a high content of cysteine residues that bind various heavy metals.
    
 
 0.484
A306_00001640
Cytochrome b5.
   
 
 0.469
GAPDH
Glyceraldehyde-3-phosphate dehydrogenase.
   
  
 0.448
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
      
 0.424
SLN
Sarcolipin.
   
  
 0.417
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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