STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIC8BRIC8 guanine nucleotide exchange factor B. (536 aa)    
Predicted Functional Partners:
ALDH18A1
Aldehyde dehydrogenase 18 family, member A1.
      
 0.681
GNA11
Guanine nucleotide-binding protein subunit alpha-11.
    
 
 0.571
A306_00007955
Guanine nucleotide-binding protein G(Q) subunit alpha.
    
 
 0.571
A306_00007954
Guanine nucleotide-binding protein subunit alpha-14.
    
 
 0.571
GNAT1
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
    
 
 0.539
GNAI2
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2.
    
 
 0.539
GNAT2
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
    
 
 0.539
GNAI3
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.
    
 
 0.539
GNAO1
Guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O.
    
 
 0.539
GNAT3
Guanine nucleotide-binding protein G(T) subunit alpha-3.
    
 
 0.539
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.