STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALMS1Alstrom syndrome protein 1. (1560 aa)    
Predicted Functional Partners:
UNC79
Uncharacterized protein.
    
 0.772
PLK1
Polo-like kinase 1.
    
  0.612
RANBP2
RAN binding protein 2, transcript variant X1.
    
 0.533
KDM6A
Lysine (K)-specific demethylase 6A.
   
 0.494
A306_00008444
Interleukin-9 receptor-like.
  
     0.458
PLK3
Polo-like kinase 3.
    
  0.449
PLK2
Polo-like kinase 2, transcript variant X2.
    
  0.449
ZFAND4
Zinc finger, AN1-type domain 4.
   
  0.446
RAB3IP
RAB3A interacting protein, transcript variant X1.
    
  0.431
A306_00014228
Ras-related protein Rab-11A-like.
    
  0.428
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.