STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBX3Chromobox homolog 3, transcript variant X1. (190 aa)    
Predicted Functional Partners:
EHMT1
Euchromatic histone-lysine N-methyltransferase 1.
    
 0.944
PCGF6
Polycomb group ring finger 6.
    
 0.921
L3MBTL2
Lethal(3)malignant brain tumor-like 2 protein.
    
 0.910
E2F6
E2F transcription factor 6, transcript variant X1.
   
 0.903
SUV39H2
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
   
0.860
CACNB4
Calcium channel, voltage-dependent, beta 4 subunit.
    
   0.788
POGZ
Pogo transposable element with ZNF domain.
   
 
 0.741
A306_00015166
E3 ubiquitin-protein ligase RING2-A.
    
 0.725
RNF2
E3 ubiquitin-protein ligase RING2.
    
 0.725
YAF2
YY1 associated factor 2.
    
 0.709
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.