STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VILLVillin-like. (559 aa)    
Predicted Functional Partners:
COG8
Conserved oligomeric Golgi complex subunit 8-like.
    
 
 0.611
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 
 0.561
CASK
Calcium/calmodulin-dependent serine protein kinase (MAGUK family), transcript variant X1; Belongs to the MAGUK family.
   
  0.553
COG4
Component of oligomeric golgi complex 4.
    
 
 0.537
COG3
Component of oligomeric golgi complex 3.
    
 
 0.530
A306_00014514
Myosin-IIIb-like; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.437
A306_00014513
Putative LOC102096867; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.437
MYO3B
Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.437
MYO3A
Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.437
DFNB31
Deafness, autosomal recessive 31.
     
 0.402
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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