STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A306_00000622Solute carrier family 22 member 2. (526 aa)    
Predicted Functional Partners:
INTS9
Integrator complex subunit 9, transcript variant X2.
    
 0.489
INTS1
Integrator complex subunit 1.
    
 0.476
CPSF3L
Cleavage and polyadenylation specific factor 3-like.
    
 0.472
INTS4
Integrator complex subunit 4.
    
 0.466
INTS3
Integrator complex subunit 3.
    
 0.461
SV2C
Synaptic vesicle glycoprotein 2C, transcript variant X1.
  
     0.456
ASUN
Asunder spermatogenesis regulator, transcript variant X1.
    
 0.454
A306_00008686
Solute carrier family 2, facilitated glucose transporter member 11.
  
 
 0.447
INTS10
Integrator complex subunit 10.
    
 0.434
SV2A
Synaptic vesicle glycoprotein 2A.
  
     0.412
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.