STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPP40Ribonuclease P/MRP 40kDa subunit. (313 aa)    
Predicted Functional Partners:
RPP38
Ribonuclease P/MRP 38kDa subunit.
    
 0.969
RPP30
Ribonuclease P/MRP 30kDa subunit.
    
 0.966
RPP25
Ribonuclease P/MRP 25kDa subunit.
    
 0.966
POP5
POP5 homolog, ribonuclease P/MRP subunit.
   
 0.961
POP4
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
    
 0.928
POP1
POP1 homolog, ribonuclease P/MRP subunit.
    
  0.904
RPS2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
  0.666
RPS7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 0.631
RPS6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.628
RPS14
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
  0.610
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.