STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPD52Tumor protein D52. (257 aa)    
Predicted Functional Partners:
TPD52L1
Tumor protein D52-like 1, transcript variant X2.
    
 
0.768
MAL2
Mal, T-cell differentiation protein 2.
   
 
 0.594
TFRC
Transferrin receptor, transcript variant X1.
     
 0.577
AP4E1
AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.
     
 0.573
YIPF6
Protein YIPF.
     
 0.568
TPD52L2
Tumor protein D52-like 2.
    
  
0.565
AP1S2
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.556
A306_00012569
Vesicle-associated membrane protein 2.
     
 0.489
VAMP1
Vesicle-associated membrane protein 1 (Synaptobrevin 1).
     
 0.489
VAMP7
Vesicle-associated membrane protein 7, transcript variant X1; Belongs to the synaptobrevin family.
     
 0.463
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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