STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A3Solute carrier family 39 (Zinc transporter), member 3. (313 aa)    
Predicted Functional Partners:
SAMM50
Sorting and assembly machinery component 50 like protein.
    
 
 0.846
A306_00000364
Uncharacterized protein.
   
 
 0.745
MTX1
Metaxin 1.
    
 
 0.716
MTX3
Metaxin 3.
    
 
 0.716
SLC39A11
Solute carrier family 39, member 11.
   
 0.707
A306_00013852
Uncharacterized protein.
   
 
 0.665
SLC39A9
Solute carrier family 39, member 9.
    
 
 0.638
SLC39A13
Solute carrier family 39 (Zinc transporter), member 13.
   
 0.591
SLC39A12
Solute carrier family 39 (Zinc transporter), member 12.
   
 0.587
SLC30A9
Solute carrier family 30 (Zinc transporter), member 9.
   
  
 0.557
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.