STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A306_00009529Alcohol dehydrogenase 1-like. (376 aa)    
Predicted Functional Partners:
ESD
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
 0.960
ALDH3B1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.938
ALDH1A2
Aldehyde dehydrogenase 1 family, member A2; Belongs to the aldehyde dehydrogenase family.
 
 0.937
ALDH1A3
Aldehyde dehydrogenase 1 family, member A3; Belongs to the aldehyde dehydrogenase family.
 
 0.937
ALDH1A1
Aldehyde dehydrogenase 1 family, member A1, transcript variant X2; Belongs to the aldehyde dehydrogenase family.
  
 0.937
A306_00009723
Amine oxidase.
  
 
 0.912
A306_00009724
Amine oxidase [flavin-containing] A.
  
 
 0.912
AOX1
Aldehyde oxidase 1.
   
 
 0.909
A306_00010633
Cytochrome P450 26A1; Belongs to the cytochrome P450 family.
  
 
 0.908
RETSAT
Retinol saturase (All-trans-retinol 13,14-reductase).
  
 
 0.905
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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