STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MFI2Ovotransferrin; Belongs to the transferrin family. (737 aa)    
Predicted Functional Partners:
TFRC
Transferrin receptor, transcript variant X1.
  
 0.796
SRPRB
Signal recognition particle receptor, B subunit.
 
      0.705
LYZ
Lysozyme; Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Belongs to the glycosyl hydrolase 22 family.
    
 0.593
CLUL1
Clusterin; Belongs to the clusterin family.
   
 0.586
A306_00009426
Ovocalyxin-32.
      
 0.547
CASK
Calcium/calmodulin-dependent serine protein kinase (MAGUK family), transcript variant X1; Belongs to the MAGUK family.
   
 0.530
ALB
Albumin.
   
  
 0.482
VTN
Vitronectin.
   
 
 0.459
APP
Amyloid beta (A4) protein.
    
 0.452
A306_00001788
Ovalbumin-related protein Y, transcript variant X1; Belongs to the serpin family.
   
 0.451
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.