STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA68561.1Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family. (348 aa)    
Predicted Functional Partners:
SEA68583.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SEA68533.1
Branched-chain amino acid transport system ATP-binding protein/urea transport system ATP-binding protein.
 
 0.993
SEA18144.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.989
SEA18087.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
  0.965
SEA69159.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.965
SEA68511.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; Belongs to the amidase family.
 
 
  0.963
SEA55259.1
Urea transport system ATP-binding protein.
 
 0.962
SEA68604.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
 0.958
SEA83216.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
  0.928
SDZ99164.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
  0.926
Your Current Organism:
Rubrimonas cliftonensis
NCBI taxonomy Id: 89524
Other names: CIP 105913, DSM 15345, JCM 10189, NBRC 100047, R. cliftonensis, strain OCh 317
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