STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASZ78_005883Uncharacterized protein. (187 aa)    
Predicted Functional Partners:
ASZ78_000889
Uncharacterized protein.
    
 0.896
ASZ78_005884
Uncharacterized protein.
 
      0.875
ASZ78_001768
Uncharacterized protein.
    
 0.801
ASZ78_005882
Uncharacterized protein.
 
     0.734
ASZ78_012605
Uncharacterized protein.
     
 0.677
ASZ78_013567
Occludin_ELL domain-containing protein.
    
 0.650
ASZ78_013568
ELL domain-containing protein.
    
 0.650
ASZ78_008305
Uncharacterized protein.
    
  0.599
ASZ78_003903
RTR1-type domain-containing protein.
   
 
 0.591
ASZ78_000888
Uncharacterized protein.
    
  0.579
Your Current Organism:
Callipepla squamata
NCBI taxonomy Id: 9009
Other names: C. squamata, scaled quail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.