STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HZI6Coproporphyrinogen III oxidase. (309 aa)    
Predicted Functional Partners:
A0A1X2IGI0
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
 0.886
A0A1X2IMD0
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
 
 0.867
A0A1X2ITF2
S-adenosyl-L-methionine-dependent methyltransferase.
   
 
 0.748
A0A1X2J1Z0
N6-adenine-specific DNA methyltransferase 1.
   
 
 0.748
A0A1X2J491
S-adenosyl-L-methionine-dependent methyltransferase.
   
 
 0.748
A0A1X2I2P8
Porphobilinogen deaminase.
  
  
 0.574
A0A1X2HZK9
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
  
  
 0.539
A0A1X2IRD3
Oxoglutarate and iron-dependent oxygenase degradation C-term-domain-containing protein.
   
  
 0.514
A0A1X2IWH2
Oxoglutarate and iron-dependent oxygenase degradation C-term-domain-containing protein.
   
  
 0.514
A0A1X2HZ00
GFO_IDH_MocA domain-containing protein.
   
 
 0.511
Your Current Organism:
Absidia repens
NCBI taxonomy Id: 90262
Other names: A. repens, CBS 115583
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