STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2I879P-loop containing nucleoside triphosphate hydrolase protein. (615 aa)    
Predicted Functional Partners:
A0A1X2I374
Ribosomal protein L16p/L10e-domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
   
 
 0.714
A0A1X2IPX8
Ribosomal protein S5 domain 2-type protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.683
A0A1X2HYM3
Translation protein SH3-like domain-containing protein.
  
 
 0.678
A0A1X2HR59
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.677
A0A1X2IY87
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.666
A0A1X2HX61
PHB domain-containing protein.
   
 0.640
A0A1X2HX77
PHB domain-containing protein.
   
 0.640
A0A1X2HXB4
PHB domain-containing protein.
   
 0.640
A0A1X2IF08
PHB domain-containing protein.
   
 0.640
A0A1X2ISF0
Prohibitin.
   
 0.640
Your Current Organism:
Absidia repens
NCBI taxonomy Id: 90262
Other names: A. repens, CBS 115583
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