STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2I9N0Snf7-domain-containing protein. (223 aa)    
Predicted Functional Partners:
A0A1X2ITM3
Snf7 family.
    
 0.989
A0A1X2J0S4
Snf7 family.
   
 0.984
A0A1X2IHE0
Snf7-domain-containing protein.
   
0.983
A0A1X2ITQ6
Snf7-domain-containing protein.
   
0.983
A0A1X2J0R7
Skd1 protein; Belongs to the AAA ATPase family.
    
 0.978
A0A1X2J1T6
Skd1 protein; Belongs to the AAA ATPase family.
    
 0.978
A0A1X2I6E9
Snf7 family.
   
 0.972
A0A1X2IHS1
Snf7 family.
   
0.969
A0A1X2IS88
Snf7 family.
   
0.969
A0A1X2IUI8
Uncharacterized protein.
   
 0.969
Your Current Organism:
Absidia repens
NCBI taxonomy Id: 90262
Other names: A. repens, CBS 115583
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.