STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHX9LIM/homeobox protein Lhx9; May be involved in gonadal development. (455 aa)    
Predicted Functional Partners:
EMX2
Empty spiracles homeobox 2.
   
  
 0.741
NR5A1
Uncharacterized protein.
   
  
 0.715
TBR1
T-box brain transcription factor 1.
    
 
 0.684
LDB1
LIM domain-binding protein 1; Binds to the LIM domain of a wide variety of LIM domain- containing transcription factors.
   
 
 0.668
LEUTX
Homeobox domain-containing protein.
   
 
 0.661
BARHL1
BarH like homeobox 1.
   
 
 0.659
WT1
Uncharacterized protein.
   
 
 0.657
LDB2
LIM domain-binding protein 2; Binds to the LIM domain of a wide variety of LIM domain- containing transcription factors.
    
 
 0.651
FOXL2
Transcription factor FOXL2.
   
 
 0.639
BARHL2
BarH like homeobox 2.
   
 
 0.636
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.