STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT222IF rod domain-containing protein; Belongs to the intermediate filament family. (279 aa)    
Predicted Functional Partners:
SMARCE1
HMG box domain-containing protein.
 
 
  
 0.910
TMEM60
Uncharacterized protein.
      
 0.849
ALOX15B
Uncharacterized protein.
    
 
 0.774
PEX11B
Peroxisomal biogenesis factor 11 beta.
      
 0.764
HAX1
HCLS1 associated protein X-1.
    
 
 0.762
SLC25A48
Solute carrier family 25 member 48; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.748
PPIG
Peptidylprolyl isomerase G.
    
 
 0.727
SGIP1
SH3 domain GRB2 like endophilin interacting protein 1.
      
 0.707
AJAP1
Adherens junctions associated protein 1.
      
 0.707
SMARCD2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.
    
 
 0.676
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.