STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGGHGProtein-glucosylgalactosylhydroxylysine glucosidase; Catalyzes the hydrolysis of glucose from the disaccharide unit linked to hydroxylysine residues of collagen and collagen-like proteins. (710 aa)    
Predicted Functional Partners:
PUDP
Pseudouridine 5'-phosphatase.
  
 
 0.969
GNE
Epimerase_2 domain-containing protein.
    
 0.925
GALM
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.914
MOGS
Mannosyl-oligosaccharide glucosidase.
   
  
 0.819
YIPF6
Protein YIPF.
  
 0.772
IFITM5
Uncharacterized protein.
   
  
 0.762
IFITM10
Interferon induced transmembrane protein 10.
      
 0.714
LOC422993
Interferon-inducible transmembrane protein 1.
      
 0.711
TIMM8A
zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family.
      
 0.707
AMY1A
Alpha-amylase.
  
 
 0.618
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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