STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARFGEF2ADP ribosylation factor guanine nucleotide exchange factor 2. (1792 aa)    
Predicted Functional Partners:
ARL1
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.782
DCHS1
Uncharacterized protein.
   
  
 0.766
ERMARD
ER membrane associated RNA degradation.
      
 0.716
POLR2M
RNA polymerase II subunit M.
      
 0.703
SEC63
SEC63 homolog, protein translocation regulator.
   
  
 0.661
CMTM4
CKLF like MARVEL transmembrane domain containing 4.
   
  
 0.615
WDR44
WD_REPEATS_REGION domain-containing protein.
   
  
 0.605
AP1AR
Adaptor related protein complex 1 associated regulatory protein.
      
 0.604
NHSL2
NHS like 2.
      
 0.601
TMTC3
Transmembrane O-mannosyltransferase targeting cadherins 3.
   
  
 0.593
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.