STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSXBrain-specific homeobox protein homolog; DNA binding protein that function as transcriptional activator. May play a role in the determination and function of cell types in the brain (233 aa)    
Predicted Functional Partners:
SOX5
Transcription factor lsox5-ii; Transcription factor SOX-5
   
 
 0.798
POUV
POU domain, class 5, transcription factor 3; Required for the maintenance of pluripotency and self- renewal of embryonic stem cells. Transcriptional activator that binds the DNA consensus sequence 5'-ATGCAAAT-3'; Belongs to the POU transcription factor family
   
 
 0.794
SOX6
Transcription factor sox5/6/13 (sox group d); Sox6 isoform 2; SRY (sex determining region Y)-box 6
   
 
 0.789
BPTF
Nucleosome-remodeling factor subunit bptf isoform x12; Bromodomain PHD finger transcription factor
    
 
 0.721
AGRP
Agouti-related protein; Gallus gallus agouti related protein homolog (mouse) (AGRP), mRNA
      
 0.698
SPTSSB
Serine palmitoyltransferase small subunit b isoform 1; Uncharacterized protein; Serine palmitoyltransferase, small subunit B
   
  
 0.668
MYT1
Myelin transcription factor 1 isoform x1; Myelin transcription factor 1
      
 0.661
POU2F3
Pou domain, class 2, transcription factor 3 isoform x1; POU domain protein; POU class 2 homeobox 3
   
 
 0.638
ITPKA
Kinase; Gallus gallus inositol 1,4,5-trisphosphate 3-kinase A (ITPKA), mRNA; Belongs to the inositol phosphokinase (IPK) family
      
 0.638
POU6F2
Pou domain, class 6, transcription factor 2; POU domain protein; POU class 6 homeobox 2
   
 
 0.634
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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