TRA2B protein (Gallus gallus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TRA2B

Transformer-2 beta. (289 aa)

Predicted Functional Partners:

SRSF3

0.985

SRSF1

0.967

SRSF2

0.932

SRSF7

0.926

SRSF10

0.887

SRSF7L

0.884

HNRNPA2B1

0.868

SNRPD2

0.860

U2AF2

0.860

SRSF6

0.791

Your Current Organism:

Gallus gallus

NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HNRNPA2B1	SNRPD2	ENSGALP00000056944	ENSGALP00000070288	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.525
HNRNPA2B1	SRSF1	ENSGALP00000056944	ENSGALP00000038262	Uncharacterized protein.	Serine/arginine-rich splicing factor 1; May play a role in preventing exon skipping, ensuring the accuracy of splicing and regulating alternative splicing.	0.903
HNRNPA2B1	SRSF10	ENSGALP00000056944	ENSGALP00000006566	Uncharacterized protein.	RRM domain-containing protein.	0.627
HNRNPA2B1	SRSF2	ENSGALP00000056944	ENSGALP00000056912	Uncharacterized protein.	Serine/arginine-rich splicing factor 2; Necessary for the splicing of pre-mRNA. It is required for formation of the earliest ATP-dependent splicing complex and interacts with spliceosomal components bound to both the 5'- and 3'-splice sites during spliceosome assembly. It also is required for ATP-dependent interactions of both U1 and U2 snRNPs with pre-mRNA.	0.823
HNRNPA2B1	SRSF3	ENSGALP00000056944	ENSGALP00000000734	Uncharacterized protein.	RRM domain-containing protein.	0.904
HNRNPA2B1	SRSF6	ENSGALP00000056944	ENSGALP00000048937	Uncharacterized protein.	Uncharacterized protein.	0.568
HNRNPA2B1	SRSF7	ENSGALP00000056944	ENSGALP00000044308	Uncharacterized protein.	Uncharacterized protein.	0.656
HNRNPA2B1	SRSF7L	ENSGALP00000056944	ENSGALP00000057523	Uncharacterized protein.	Uncharacterized protein.	0.727
HNRNPA2B1	TRA2B	ENSGALP00000056944	ENSGALP00000010541	Uncharacterized protein.	Transformer-2 beta.	0.868
HNRNPA2B1	U2AF2	ENSGALP00000056944	ENSGALP00000070353	Uncharacterized protein.	U2 small nuclear RNA auxiliary factor 2.	0.629
SNRPD2	HNRNPA2B1	ENSGALP00000070288	ENSGALP00000056944	Small nuclear ribonucleoprotein Sm D2.	Uncharacterized protein.	0.525
SNRPD2	SRSF1	ENSGALP00000070288	ENSGALP00000038262	Small nuclear ribonucleoprotein Sm D2.	Serine/arginine-rich splicing factor 1; May play a role in preventing exon skipping, ensuring the accuracy of splicing and regulating alternative splicing.	0.785
SNRPD2	SRSF10	ENSGALP00000070288	ENSGALP00000006566	Small nuclear ribonucleoprotein Sm D2.	RRM domain-containing protein.	0.423
SNRPD2	SRSF3	ENSGALP00000070288	ENSGALP00000000734	Small nuclear ribonucleoprotein Sm D2.	RRM domain-containing protein.	0.597
SNRPD2	SRSF6	ENSGALP00000070288	ENSGALP00000048937	Small nuclear ribonucleoprotein Sm D2.	Uncharacterized protein.	0.599
SNRPD2	SRSF7	ENSGALP00000070288	ENSGALP00000044308	Small nuclear ribonucleoprotein Sm D2.	Uncharacterized protein.	0.419
SNRPD2	SRSF7L	ENSGALP00000070288	ENSGALP00000057523	Small nuclear ribonucleoprotein Sm D2.	Uncharacterized protein.	0.419
SNRPD2	TRA2B	ENSGALP00000070288	ENSGALP00000010541	Small nuclear ribonucleoprotein Sm D2.	Transformer-2 beta.	0.860
SNRPD2	U2AF2	ENSGALP00000070288	ENSGALP00000070353	Small nuclear ribonucleoprotein Sm D2.	U2 small nuclear RNA auxiliary factor 2.	0.990
SRSF1	HNRNPA2B1	ENSGALP00000038262	ENSGALP00000056944	Serine/arginine-rich splicing factor 1; May play a role in preventing exon skipping, ensuring the accuracy of splicing and regulating alternative splicing.	Uncharacterized protein.	0.903