Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RHOGL-2 | TAF11 | ENSGALP00000064938 | ENSGALP00000004305 | Transcription initiation factor TFIID subunit. | TAFII28 domain-containing protein. | 0.998 |
RHOGL-2 | TAF12 | ENSGALP00000064938 | ENSGALP00000001461 | Transcription initiation factor TFIID subunit. | TFIID_20kDa domain-containing protein. | 0.998 |
RHOGL-2 | TAF13 | ENSGALP00000064938 | ENSGALP00000063601 | Transcription initiation factor TFIID subunit. | Uncharacterized protein. | 0.998 |
RHOGL-2 | TAF2 | ENSGALP00000064938 | ENSGALP00000057559 | Transcription initiation factor TFIID subunit. | Transcription initiation factor TFIID subunit 2; Transcription factor TFIID is one of the general factors required for accurate and regulated initiation by RNA polymerase II. TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors. It requires core promoter-specific cofactors for productive transcription stimulation. TAF2 stabilizes TFIID binding to core promoter (By similarity). | 0.998 |
RHOGL-2 | TAF3 | ENSGALP00000064938 | ENSGALP00000010875 | Transcription initiation factor TFIID subunit. | Transcription initiation factor TFIID subunit 3; Transcription factor TFIID is one of the general factors required for accurate and regulated initiation by RNA polymerase II. TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors. Required in complex with TBPL2 for the differentiation of myoblasts into myocytes. The complex replaces TFIID at specific promoters at an early stage in the differentiation process (By similarity). | 0.989 |
RHOGL-2 | TAF4 | ENSGALP00000064938 | ENSGALP00000008211 | Transcription initiation factor TFIID subunit. | TATA-box binding protein associated factor 4. | 0.990 |
RHOGL-2 | TAF5 | ENSGALP00000064938 | ENSGALP00000013398 | Transcription initiation factor TFIID subunit. | Uncharacterized protein. | 0.984 |
RHOGL-2 | TAF6 | ENSGALP00000064938 | ENSGALP00000066169 | Transcription initiation factor TFIID subunit. | TATA-box binding protein associated factor 6. | 0.998 |
RHOGL-2 | TAF7 | ENSGALP00000064938 | ENSGALP00000045227 | Transcription initiation factor TFIID subunit. | TAFII55_N domain-containing protein. | 0.998 |
RHOGL-2 | TAF8 | ENSGALP00000064938 | ENSGALP00000042057 | Transcription initiation factor TFIID subunit. | Transcription initiation factor TFIID subunit 8; Transcription factor TFIID is one of the general factors required for accurate and regulated initiation by RNA polymerase II. Mediates both basal and activator-dependent transcription (By similarity). | 0.996 |
TAF11 | RHOGL-2 | ENSGALP00000004305 | ENSGALP00000064938 | TAFII28 domain-containing protein. | Transcription initiation factor TFIID subunit. | 0.998 |
TAF11 | TAF12 | ENSGALP00000004305 | ENSGALP00000001461 | TAFII28 domain-containing protein. | TFIID_20kDa domain-containing protein. | 0.999 |
TAF11 | TAF13 | ENSGALP00000004305 | ENSGALP00000063601 | TAFII28 domain-containing protein. | Uncharacterized protein. | 0.999 |
TAF11 | TAF2 | ENSGALP00000004305 | ENSGALP00000057559 | TAFII28 domain-containing protein. | Transcription initiation factor TFIID subunit 2; Transcription factor TFIID is one of the general factors required for accurate and regulated initiation by RNA polymerase II. TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors. It requires core promoter-specific cofactors for productive transcription stimulation. TAF2 stabilizes TFIID binding to core promoter (By similarity). | 0.999 |
TAF11 | TAF3 | ENSGALP00000004305 | ENSGALP00000010875 | TAFII28 domain-containing protein. | Transcription initiation factor TFIID subunit 3; Transcription factor TFIID is one of the general factors required for accurate and regulated initiation by RNA polymerase II. TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors. Required in complex with TBPL2 for the differentiation of myoblasts into myocytes. The complex replaces TFIID at specific promoters at an early stage in the differentiation process (By similarity). | 0.999 |
TAF11 | TAF4 | ENSGALP00000004305 | ENSGALP00000008211 | TAFII28 domain-containing protein. | TATA-box binding protein associated factor 4. | 0.995 |
TAF11 | TAF5 | ENSGALP00000004305 | ENSGALP00000013398 | TAFII28 domain-containing protein. | Uncharacterized protein. | 0.995 |
TAF11 | TAF6 | ENSGALP00000004305 | ENSGALP00000066169 | TAFII28 domain-containing protein. | TATA-box binding protein associated factor 6. | 0.999 |
TAF11 | TAF7 | ENSGALP00000004305 | ENSGALP00000045227 | TAFII28 domain-containing protein. | TAFII55_N domain-containing protein. | 0.996 |
TAF11 | TAF8 | ENSGALP00000004305 | ENSGALP00000042057 | TAFII28 domain-containing protein. | Transcription initiation factor TFIID subunit 8; Transcription factor TFIID is one of the general factors required for accurate and regulated initiation by RNA polymerase II. Mediates both basal and activator-dependent transcription (By similarity). | 0.998 |
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