Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BEST1 | CNGB3 | ENSGALP00000011669 | ENSGALP00000051823 | Bestrophin 1. | Cyclic nucleotide gated channel subunit beta 3. | 0.584 |
BEST1 | IMPG2 | ENSGALP00000011669 | ENSGALP00000036121 | Bestrophin 1. | Interphotoreceptor matrix proteoglycan 2; Chondroitin sulfate- and hyaluronan-binding proteoglycan involved in the organization of interphotoreceptor matrix. | 0.593 |
BEST1 | LRRC8A | ENSGALP00000011669 | ENSGALP00000044227 | Bestrophin 1. | Leucine rich repeat containing 8 VRAC subunit A. | 0.603 |
BEST1 | MERTK | ENSGALP00000011669 | ENSGALP00000054188 | Bestrophin 1. | Uncharacterized protein. | 0.698 |
BEST1 | PDE6B | ENSGALP00000011669 | ENSGALP00000032161 | Bestrophin 1. | Phosphodiesterase. | 0.582 |
BEST1 | PMEL | ENSGALP00000011669 | ENSGALP00000051268 | Bestrophin 1. | Melanocyte protein PMEL; Might be required for polymerization of melanin onto the core structure of melanosomes with enzymic function of tyrosinase; Belongs to the PMEL/NMB family. | 0.600 |
BEST1 | RLBP1 | ENSGALP00000011669 | ENSGALP00000041666 | Bestrophin 1. | CRAL-TRIO domain-containing protein. | 0.626 |
BEST1 | RPE65 | ENSGALP00000011669 | ENSGALP00000018351 | Bestrophin 1. | Retinoid isomerohydrolase; Critical isomerohydrolase in the retinoid cycle involved in regeneration of 11-cis-retinal, the chromophore of rod and cone opsins. Catalyzes the cleavage and isomerization of all-trans-retinyl fatty acid esters to 11-cis-retinol which is further oxidized by 11-cis retinol dehydrogenase to 11-cis-retinal for use as visual chromophore. Essential for the production of 11-cis retinal for both rod and cone photoreceptors (By similarity). Also capable of catalyzing the isomerization of lutein to meso-zeaxanthin an eye- specific carotenoid. The soluble form binds v [...] | 0.861 |
BEST1 | RRH | ENSGALP00000011669 | ENSGALP00000019862 | Bestrophin 1. | G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. | 0.597 |
BEST1 | SLC16A8 | ENSGALP00000011669 | ENSGALP00000044229 | Bestrophin 1. | Monocarboxylate transporter 3; Proton-linked monocarboxylate transporter. Catalyzes the rapid transport across the plasma membrane of many monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and the ketone bodies acetoacetate, beta-hydroxybutyrate and acetate (By similarity); Belongs to the major facilitator superfamily. Monocarboxylate porter (TC 2.A.1.13) family. | 0.600 |
CNGB3 | BEST1 | ENSGALP00000051823 | ENSGALP00000011669 | Cyclic nucleotide gated channel subunit beta 3. | Bestrophin 1. | 0.584 |
CNGB3 | MERTK | ENSGALP00000051823 | ENSGALP00000054188 | Cyclic nucleotide gated channel subunit beta 3. | Uncharacterized protein. | 0.501 |
CNGB3 | PDE6B | ENSGALP00000051823 | ENSGALP00000032161 | Cyclic nucleotide gated channel subunit beta 3. | Phosphodiesterase. | 0.758 |
CNGB3 | RLBP1 | ENSGALP00000051823 | ENSGALP00000041666 | Cyclic nucleotide gated channel subunit beta 3. | CRAL-TRIO domain-containing protein. | 0.482 |
CNGB3 | RPE65 | ENSGALP00000051823 | ENSGALP00000018351 | Cyclic nucleotide gated channel subunit beta 3. | Retinoid isomerohydrolase; Critical isomerohydrolase in the retinoid cycle involved in regeneration of 11-cis-retinal, the chromophore of rod and cone opsins. Catalyzes the cleavage and isomerization of all-trans-retinyl fatty acid esters to 11-cis-retinol which is further oxidized by 11-cis retinol dehydrogenase to 11-cis-retinal for use as visual chromophore. Essential for the production of 11-cis retinal for both rod and cone photoreceptors (By similarity). Also capable of catalyzing the isomerization of lutein to meso-zeaxanthin an eye- specific carotenoid. The soluble form binds v [...] | 0.739 |
IMPG2 | BEST1 | ENSGALP00000036121 | ENSGALP00000011669 | Interphotoreceptor matrix proteoglycan 2; Chondroitin sulfate- and hyaluronan-binding proteoglycan involved in the organization of interphotoreceptor matrix. | Bestrophin 1. | 0.593 |
LRRC8A | BEST1 | ENSGALP00000044227 | ENSGALP00000011669 | Leucine rich repeat containing 8 VRAC subunit A. | Bestrophin 1. | 0.603 |
MERTK | BEST1 | ENSGALP00000054188 | ENSGALP00000011669 | Uncharacterized protein. | Bestrophin 1. | 0.698 |
MERTK | CNGB3 | ENSGALP00000054188 | ENSGALP00000051823 | Uncharacterized protein. | Cyclic nucleotide gated channel subunit beta 3. | 0.501 |
MERTK | RLBP1 | ENSGALP00000054188 | ENSGALP00000041666 | Uncharacterized protein. | CRAL-TRIO domain-containing protein. | 0.511 |
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