STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMD7Sterile alpha motif domain containing 7. (542 aa)    
Predicted Functional Partners:
SAMD14
Sterile alpha motif domain containing 14.
      
 0.776
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
 
 0.742
GPR160
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.702
COPS9
Uncharacterized protein.
      
 0.675
OTOS
Uncharacterized protein.
   
  
 0.666
SAMD5
Sterile alpha motif domain containing 5.
      
 0.642
CERKL
DAGKc domain-containing protein.
      
 0.595
SEC62
Translocation protein SEC62; Required for preprotein translocation.
 
    
 0.540
ATP1A1
Sodium/potassium-transporting ATPase subunit alpha-1; This is the catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of sodium and potassium ions across the plasma membrane. This action creates the electrochemical gradient of sodium and potassium ions, providing the energy for active transport of various nutrients.
      
 0.529
EYS
Uncharacterized protein.
   
  
 0.505
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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