Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANKRD40 | RIMS3 | ENSGALP00000011934 | ENSGALP00000070184 | ANK_REP_REGION domain-containing protein. | Regulating synaptic membrane exocytosis 3. | 0.844 |
ANKRD40 | SESTD1 | ENSGALP00000011934 | ENSGALP00000014676 | ANK_REP_REGION domain-containing protein. | SEC14 and spectrin domain containing 1. | 0.844 |
ANKRD40 | SRGAP1 | ENSGALP00000011934 | ENSGALP00000055157 | ANK_REP_REGION domain-containing protein. | Uncharacterized protein. | 0.702 |
ANKRD40 | SUPT20H | ENSGALP00000011934 | ENSGALP00000035685 | ANK_REP_REGION domain-containing protein. | Transcription factor SPT20 homolog; Required for MAP kinase p38 (MAPK11, MAPK12, MAPK13 and/or MAPK14) activation during gastrulation. | 0.878 |
CDC42 | ITSN1 | ENSGALP00000065867 | ENSGALP00000047474 | Cell division control protein 42 homolog; Plasma membrane-associated small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses. Involved in epithelial cell polarization processes. Regulates the bipolar attachment of spindle microtubules to kinetochores before chromosome congression in metaphase. Regulates cell migration. Plays a role in the extension and maintenance of the formation of thin, actin- rich surface projections called filopodia. Also plays a role in phagocytos [...] | Intersectin 1. | 0.994 |
CDC42 | ITSN2 | ENSGALP00000065867 | ENSGALP00000074049 | Cell division control protein 42 homolog; Plasma membrane-associated small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses. Involved in epithelial cell polarization processes. Regulates the bipolar attachment of spindle microtubules to kinetochores before chromosome congression in metaphase. Regulates cell migration. Plays a role in the extension and maintenance of the formation of thin, actin- rich surface projections called filopodia. Also plays a role in phagocytos [...] | Intersectin 2. | 0.988 |
CDC42 | RHOA | ENSGALP00000065867 | ENSGALP00000033584 | Cell division control protein 42 homolog; Plasma membrane-associated small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses. Involved in epithelial cell polarization processes. Regulates the bipolar attachment of spindle microtubules to kinetochores before chromosome congression in metaphase. Regulates cell migration. Plays a role in the extension and maintenance of the formation of thin, actin- rich surface projections called filopodia. Also plays a role in phagocytos [...] | GTP-binding protein. | 0.477 |
CDC42 | ROBO1 | ENSGALP00000065867 | ENSGALP00000069251 | Cell division control protein 42 homolog; Plasma membrane-associated small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses. Involved in epithelial cell polarization processes. Regulates the bipolar attachment of spindle microtubules to kinetochores before chromosome congression in metaphase. Regulates cell migration. Plays a role in the extension and maintenance of the formation of thin, actin- rich surface projections called filopodia. Also plays a role in phagocytos [...] | Roundabout guidance receptor 1. | 0.409 |
CDC42 | SRGAP1 | ENSGALP00000065867 | ENSGALP00000055157 | Cell division control protein 42 homolog; Plasma membrane-associated small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses. Involved in epithelial cell polarization processes. Regulates the bipolar attachment of spindle microtubules to kinetochores before chromosome congression in metaphase. Regulates cell migration. Plays a role in the extension and maintenance of the formation of thin, actin- rich surface projections called filopodia. Also plays a role in phagocytos [...] | Uncharacterized protein. | 0.746 |
ITSN1 | CDC42 | ENSGALP00000047474 | ENSGALP00000065867 | Intersectin 1. | Cell division control protein 42 homolog; Plasma membrane-associated small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses. Involved in epithelial cell polarization processes. Regulates the bipolar attachment of spindle microtubules to kinetochores before chromosome congression in metaphase. Regulates cell migration. Plays a role in the extension and maintenance of the formation of thin, actin- rich surface projections called filopodia. Also plays a role in phagocytos [...] | 0.994 |
ITSN1 | ITSN2 | ENSGALP00000047474 | ENSGALP00000074049 | Intersectin 1. | Intersectin 2. | 0.604 |
ITSN1 | RHOA | ENSGALP00000047474 | ENSGALP00000033584 | Intersectin 1. | GTP-binding protein. | 0.938 |
ITSN1 | SRGAP1 | ENSGALP00000047474 | ENSGALP00000055157 | Intersectin 1. | Uncharacterized protein. | 0.601 |
ITSN2 | CDC42 | ENSGALP00000074049 | ENSGALP00000065867 | Intersectin 2. | Cell division control protein 42 homolog; Plasma membrane-associated small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses. Involved in epithelial cell polarization processes. Regulates the bipolar attachment of spindle microtubules to kinetochores before chromosome congression in metaphase. Regulates cell migration. Plays a role in the extension and maintenance of the formation of thin, actin- rich surface projections called filopodia. Also plays a role in phagocytos [...] | 0.988 |
ITSN2 | ITSN1 | ENSGALP00000074049 | ENSGALP00000047474 | Intersectin 2. | Intersectin 1. | 0.604 |
ITSN2 | RHOA | ENSGALP00000074049 | ENSGALP00000033584 | Intersectin 2. | GTP-binding protein. | 0.926 |
ITSN2 | SRGAP1 | ENSGALP00000074049 | ENSGALP00000055157 | Intersectin 2. | Uncharacterized protein. | 0.685 |
QSER1 | SRGAP1 | ENSGALP00000065379 | ENSGALP00000055157 | DUF4211 domain-containing protein. | Uncharacterized protein. | 0.591 |
RHOA | CDC42 | ENSGALP00000033584 | ENSGALP00000065867 | GTP-binding protein. | Cell division control protein 42 homolog; Plasma membrane-associated small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses. Involved in epithelial cell polarization processes. Regulates the bipolar attachment of spindle microtubules to kinetochores before chromosome congression in metaphase. Regulates cell migration. Plays a role in the extension and maintenance of the formation of thin, actin- rich surface projections called filopodia. Also plays a role in phagocytos [...] | 0.477 |
RHOA | ITSN1 | ENSGALP00000033584 | ENSGALP00000047474 | GTP-binding protein. | Intersectin 1. | 0.938 |
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