STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC40Leucine-rich repeat-containing protein 40. (603 aa)    
Predicted Functional Partners:
SREK1
Splicing regulatory glutamic acid and lysine rich protein 1.
   
  
 0.858
EHBP1L1
BMERB domain-containing protein.
    
 
 0.764
SPEF2
Sperm flagellar 2.
    
 
 0.728
DLG3
Discs large MAGUK scaffold protein 3; Belongs to the MAGUK family.
    
 
 0.719
EPB41L5
Erythrocyte membrane protein band 4.1 like 5.
      
 0.705
LLGL2
LLGL scribble cell polarity complex component 2.
   
  
 0.676
MYL4
Myosin light chain, embryonic.
   
 
 0.655
KCTD19
Potassium channel tetramerization domain containing 19.
    
 
 0.652
ADGRL3
Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.
    
   0.630
ADGRL2
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
   0.630
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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