STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXJ2Forkhead box J2. (583 aa)    
Predicted Functional Partners:
PAX6
Paired box protein Pax-6; May be a transcription factor with important functions in eye and nasal development.
   
 
 0.700
SOX6
HMG box domain-containing protein.
   
 
 0.696
NF1
Neurofibromin; Stimulates the GTPase activity of Ras. NF1 shows greater affinity for Ras GAP, but lower specific activity. May be a regulator of Ras activity.
   
  
 0.634
UHRF1BP1
UHRF1 binding protein 1.
   
 
 0.585
FOXL2
Transcription factor FOXL2.
   
  
0.550
PAX2
Paired-box containing protein Pax-2.
      
 0.539
FARSA
Phenylalanine--tRNA ligase alpha subunit.
   
  
 0.535
MLF2
Uncharacterized protein.
    
 
 0.524
POU6F1
POU domain protein.
   
  
 0.522
NECAP1
NECAP endocytosis associated 1.
      
 0.478
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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