Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDC40 | PABPN1 | ENSGALP00000024253 | ENSGALP00000072793 | WD_REPEATS_REGION domain-containing protein. | RRM domain-containing protein. | 0.800 |
CDC40 | SRSF1 | ENSGALP00000024253 | ENSGALP00000038262 | WD_REPEATS_REGION domain-containing protein. | Serine/arginine-rich splicing factor 1; May play a role in preventing exon skipping, ensuring the accuracy of splicing and regulating alternative splicing. | 0.826 |
CDC40 | SRSF11 | ENSGALP00000024253 | ENSGALP00000018421 | WD_REPEATS_REGION domain-containing protein. | RRM domain-containing protein. | 0.825 |
CDC40 | SRSF2 | ENSGALP00000024253 | ENSGALP00000056912 | WD_REPEATS_REGION domain-containing protein. | Serine/arginine-rich splicing factor 2; Necessary for the splicing of pre-mRNA. It is required for formation of the earliest ATP-dependent splicing complex and interacts with spliceosomal components bound to both the 5'- and 3'-splice sites during spliceosome assembly. It also is required for ATP-dependent interactions of both U1 and U2 snRNPs with pre-mRNA. | 0.810 |
CDC40 | SRSF3 | ENSGALP00000024253 | ENSGALP00000000734 | WD_REPEATS_REGION domain-containing protein. | RRM domain-containing protein. | 0.804 |
CDC40 | SRSF5 | ENSGALP00000024253 | ENSGALP00000015326 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.830 |
CDC40 | SRSF5A | ENSGALP00000024253 | ENSGALP00000047413 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.834 |
CDC40 | SRSF7L | ENSGALP00000024253 | ENSGALP00000057523 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.800 |
CDC40 | U2AF1 | ENSGALP00000024253 | ENSGALP00000026067 | WD_REPEATS_REGION domain-containing protein. | U2snRNP auxiliary factor small subunit. | 0.824 |
CDC40 | U2AF2 | ENSGALP00000024253 | ENSGALP00000070353 | WD_REPEATS_REGION domain-containing protein. | U2 small nuclear RNA auxiliary factor 2. | 0.882 |
PABPN1 | CDC40 | ENSGALP00000072793 | ENSGALP00000024253 | RRM domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.800 |
PABPN1 | SRSF1 | ENSGALP00000072793 | ENSGALP00000038262 | RRM domain-containing protein. | Serine/arginine-rich splicing factor 1; May play a role in preventing exon skipping, ensuring the accuracy of splicing and regulating alternative splicing. | 0.886 |
PABPN1 | SRSF11 | ENSGALP00000072793 | ENSGALP00000018421 | RRM domain-containing protein. | RRM domain-containing protein. | 0.819 |
PABPN1 | SRSF2 | ENSGALP00000072793 | ENSGALP00000056912 | RRM domain-containing protein. | Serine/arginine-rich splicing factor 2; Necessary for the splicing of pre-mRNA. It is required for formation of the earliest ATP-dependent splicing complex and interacts with spliceosomal components bound to both the 5'- and 3'-splice sites during spliceosome assembly. It also is required for ATP-dependent interactions of both U1 and U2 snRNPs with pre-mRNA. | 0.841 |
PABPN1 | SRSF3 | ENSGALP00000072793 | ENSGALP00000000734 | RRM domain-containing protein. | RRM domain-containing protein. | 0.865 |
PABPN1 | SRSF5 | ENSGALP00000072793 | ENSGALP00000015326 | RRM domain-containing protein. | Uncharacterized protein. | 0.874 |
PABPN1 | SRSF5A | ENSGALP00000072793 | ENSGALP00000047413 | RRM domain-containing protein. | Uncharacterized protein. | 0.874 |
PABPN1 | SRSF7L | ENSGALP00000072793 | ENSGALP00000057523 | RRM domain-containing protein. | Uncharacterized protein. | 0.834 |
PABPN1 | U2AF1 | ENSGALP00000072793 | ENSGALP00000026067 | RRM domain-containing protein. | U2snRNP auxiliary factor small subunit. | 0.828 |
PABPN1 | U2AF2 | ENSGALP00000072793 | ENSGALP00000070353 | RRM domain-containing protein. | U2 small nuclear RNA auxiliary factor 2. | 0.883 |
page 1 of 6