STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMO1Vitelline membrane outer layer protein 1; Exact function not known, component of the outer membrane of the vitelline layer of the egg. Seems to be able to synthesize N- acetylchito-oligosaccharides (n=14-15) from hexasaccharides of N- acetylglucosamine in a manner similar to the transferase activity of lysozyme; Belongs to the VMO1 family. (183 aa)    
Predicted Functional Partners:
LOC100858647
Uncharacterized protein.
      
 0.860
BPIFB2
Protein TENP; May play a role in the developmental transition from cell proliferation to cell differentiation during neurogenesis.
      
 0.761
SPINK5
Ovoinhibitor; Seems to have at least five active inhibitory domains; two for trypsin, two for chymotrypsin and one for elastase.
      
 0.704
AvBD11
Gallinacin-11; Has bactericidal activity.
   
  
 0.702
GUCY1A2
Guanylate cyclase 1 soluble subunit alpha 2; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
    
 
 0.701
GRAMD2A
GRAM domain containing 2A.
    
 
 0.677
CHID1
Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
    
 
 0.657
LOC416959
Ovotransferrin; Belongs to the transferrin family.
   
 
 0.610
MELTF
Ovotransferrin; Belongs to the transferrin family.
   
 
 0.599
OVALX
Ovalbumin-related protein X; Belongs to the serpin family. Ov-serpin subfamily.
      
 0.584
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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