ART1 protein (Gallus gallus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ART1

NAD(P)(+)--arginine ADP-ribosyltransferase. (298 aa)

Predicted Functional Partners:

CCLI7

0.678

VPREB3

0.629

BLVRA

0.533

SRFBP1

0.485

SFTPA2

0.481

IRF9

0.478

MYBL1

0.472

OASL

0.457

IFITM5

0.403

Your Current Organism:

Gallus gallus

NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ART1	BLVRA	ENSGALP00000001282	ENSGALP00000044823	NAD(P)(+)--arginine ADP-ribosyltransferase.	Biliverdin reductase A; Reduces the gamma-methene bridge of the open tetrapyrrole, biliverdin IX alpha, to bilirubin with the concomitant oxidation of a NADH or NADPH cofactor; Belongs to the Gfo/Idh/MocA family. Biliverdin reductase subfamily.	0.533
ART1	CCLI7	ENSGALP00000001282	ENSGALP00000049505	NAD(P)(+)--arginine ADP-ribosyltransferase.	Chemokine.	0.678
ART1	IFITM5	ENSGALP00000001282	ENSGALP00000006733	NAD(P)(+)--arginine ADP-ribosyltransferase.	Uncharacterized protein.	0.403
ART1	IRF9	ENSGALP00000001282	ENSGALP00000071630	NAD(P)(+)--arginine ADP-ribosyltransferase.	IRF tryptophan pentad repeat domain-containing protein.	0.478
ART1	MYBL1	ENSGALP00000001282	ENSGALP00000044411	NAD(P)(+)--arginine ADP-ribosyltransferase.	Myb-related protein A; Strong transcriptional activator; DNA-binding protein that specifically recognize the sequence 5'-YAAC[GT]G-3'. Could have a role in the proliferation and/or differentiation of neurogenic, spermatogenic and B-lymphoid cells.	0.472
ART1	OASL	ENSGALP00000001282	ENSGALP00000028664	NAD(P)(+)--arginine ADP-ribosyltransferase.	Uncharacterized protein.	0.457
ART1	SFTPA2	ENSGALP00000001282	ENSGALP00000064871	NAD(P)(+)--arginine ADP-ribosyltransferase.	Surfactant protein A.	0.481
ART1	SRFBP1	ENSGALP00000001282	ENSGALP00000008505	NAD(P)(+)--arginine ADP-ribosyltransferase.	Serum response factor binding protein 1.	0.485
ART1	VPREB3	ENSGALP00000001282	ENSGALP00000033374	NAD(P)(+)--arginine ADP-ribosyltransferase.	V-set pre-B cell surrogate light chain 3.	0.629
BLVRA	ART1	ENSGALP00000044823	ENSGALP00000001282	Biliverdin reductase A; Reduces the gamma-methene bridge of the open tetrapyrrole, biliverdin IX alpha, to bilirubin with the concomitant oxidation of a NADH or NADPH cofactor; Belongs to the Gfo/Idh/MocA family. Biliverdin reductase subfamily.	NAD(P)(+)--arginine ADP-ribosyltransferase.	0.533
CCLI7	ART1	ENSGALP00000049505	ENSGALP00000001282	Chemokine.	NAD(P)(+)--arginine ADP-ribosyltransferase.	0.678
CCLI7	IFITM5	ENSGALP00000049505	ENSGALP00000006733	Chemokine.	Uncharacterized protein.	0.444
CCLI7	OASL	ENSGALP00000049505	ENSGALP00000028664	Chemokine.	Uncharacterized protein.	0.481
CCLI7	VPREB3	ENSGALP00000049505	ENSGALP00000033374	Chemokine.	V-set pre-B cell surrogate light chain 3.	0.507
IFITM5	ART1	ENSGALP00000006733	ENSGALP00000001282	Uncharacterized protein.	NAD(P)(+)--arginine ADP-ribosyltransferase.	0.403
IFITM5	CCLI7	ENSGALP00000006733	ENSGALP00000049505	Uncharacterized protein.	Chemokine.	0.444
IFITM5	IRF9	ENSGALP00000006733	ENSGALP00000071630	Uncharacterized protein.	IRF tryptophan pentad repeat domain-containing protein.	0.406
IFITM5	OASL	ENSGALP00000006733	ENSGALP00000028664	Uncharacterized protein.	Uncharacterized protein.	0.486
IRF9	ART1	ENSGALP00000071630	ENSGALP00000001282	IRF tryptophan pentad repeat domain-containing protein.	NAD(P)(+)--arginine ADP-ribosyltransferase.	0.478
IRF9	IFITM5	ENSGALP00000071630	ENSGALP00000006733	IRF tryptophan pentad repeat domain-containing protein.	Uncharacterized protein.	0.406