Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASTE1 | RIF1 | ENSGALP00000069552 | ENSGALP00000036991 | Uncharacterized protein. | Telomere-associated protein RIF1; Key regulator of TP53BP1 that plays a key role in the repair of double-strand DNA breaks (DSBs) in response to DNA damage: acts by promoting non-homologous end joining (NHEJ)-mediated repair of DSBs. In response to DNA damage, interacts with ATM- phosphorylated TP53BP1, allowing recruitment to DNA DSBs (By similarity). Once recruited to DSBs, RIF1 and TP53BP1 act by promoting NHEJ-mediated repair of DSBs. In the same time, RIF1 and TP53BP1 specifically counteract DSBs resection via homologous recombination (HR) during G1 phase (By similarity). | 0.786 |
ASTE1 | SHLD2 | ENSGALP00000069552 | ENSGALP00000040968 | Uncharacterized protein. | Shieldin complex subunit 2. | 0.426 |
ASTE1 | TP53BP1 | ENSGALP00000069552 | ENSGALP00000047256 | Uncharacterized protein. | Tumor protein p53 binding protein 1. | 0.753 |
ATM | BARD1 | ENSGALP00000027660 | ENSGALP00000005502 | Non-specific serine/threonine protein kinase. | Uncharacterized protein. | 0.933 |
ATM | BRCA1 | ENSGALP00000027660 | ENSGALP00000004383 | Non-specific serine/threonine protein kinase. | Uncharacterized protein. | 0.999 |
ATM | PAXIP1 | ENSGALP00000027660 | ENSGALP00000045622 | Non-specific serine/threonine protein kinase. | PAX interacting protein 1. | 0.972 |
ATM | RIF1 | ENSGALP00000027660 | ENSGALP00000036991 | Non-specific serine/threonine protein kinase. | Telomere-associated protein RIF1; Key regulator of TP53BP1 that plays a key role in the repair of double-strand DNA breaks (DSBs) in response to DNA damage: acts by promoting non-homologous end joining (NHEJ)-mediated repair of DSBs. In response to DNA damage, interacts with ATM- phosphorylated TP53BP1, allowing recruitment to DNA DSBs (By similarity). Once recruited to DSBs, RIF1 and TP53BP1 act by promoting NHEJ-mediated repair of DSBs. In the same time, RIF1 and TP53BP1 specifically counteract DSBs resection via homologous recombination (HR) during G1 phase (By similarity). | 0.783 |
ATM | RNF168 | ENSGALP00000027660 | ENSGALP00000073716 | Non-specific serine/threonine protein kinase. | E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and ubiquitinates histone H2A and H2AX, leading to amplify the RNF8-dependent H2A ubiquitination and promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recrui [...] | 0.882 |
ATM | TP53BP1 | ENSGALP00000027660 | ENSGALP00000047256 | Non-specific serine/threonine protein kinase. | Tumor protein p53 binding protein 1. | 0.977 |
BARD1 | ATM | ENSGALP00000005502 | ENSGALP00000027660 | Uncharacterized protein. | Non-specific serine/threonine protein kinase. | 0.933 |
BARD1 | BRCA1 | ENSGALP00000005502 | ENSGALP00000004383 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
BARD1 | PAXIP1 | ENSGALP00000005502 | ENSGALP00000045622 | Uncharacterized protein. | PAX interacting protein 1. | 0.844 |
BARD1 | RIF1 | ENSGALP00000005502 | ENSGALP00000036991 | Uncharacterized protein. | Telomere-associated protein RIF1; Key regulator of TP53BP1 that plays a key role in the repair of double-strand DNA breaks (DSBs) in response to DNA damage: acts by promoting non-homologous end joining (NHEJ)-mediated repair of DSBs. In response to DNA damage, interacts with ATM- phosphorylated TP53BP1, allowing recruitment to DNA DSBs (By similarity). Once recruited to DSBs, RIF1 and TP53BP1 act by promoting NHEJ-mediated repair of DSBs. In the same time, RIF1 and TP53BP1 specifically counteract DSBs resection via homologous recombination (HR) during G1 phase (By similarity). | 0.774 |
BARD1 | RNF168 | ENSGALP00000005502 | ENSGALP00000073716 | Uncharacterized protein. | E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and ubiquitinates histone H2A and H2AX, leading to amplify the RNF8-dependent H2A ubiquitination and promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recrui [...] | 0.893 |
BARD1 | SHLD1 | ENSGALP00000005502 | ENSGALP00000065910 | Uncharacterized protein. | Shieldin complex subunit 1. | 0.486 |
BARD1 | SHLD2 | ENSGALP00000005502 | ENSGALP00000040968 | Uncharacterized protein. | Shieldin complex subunit 2. | 0.582 |
BARD1 | SHLD3 | ENSGALP00000005502 | ENSGALP00000046721 | Uncharacterized protein. | Shieldin complex subunit 3. | 0.531 |
BARD1 | TP53BP1 | ENSGALP00000005502 | ENSGALP00000047256 | Uncharacterized protein. | Tumor protein p53 binding protein 1. | 0.811 |
BRCA1 | ATM | ENSGALP00000004383 | ENSGALP00000027660 | Uncharacterized protein. | Non-specific serine/threonine protein kinase. | 0.999 |
BRCA1 | BARD1 | ENSGALP00000004383 | ENSGALP00000005502 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
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