Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATF2 | ATF4 | ENSGALP00000032623 | ENSGALP00000037099 | Cyclic AMP-dependent transcription factor ATF-2; Transcriptional activator which regulates the transcription of various genes, including those involved in anti-apoptosis, cell growth, and DNA damage response. Dependent on its binding partner, binds to CRE (cAMP response element) consensus sequences (5'-TGACGTCA- 3') or to AP-1 (activator protein 1) consensus sequences (5'-TGACTCA- 3') (By similarity); Belongs to the bZIP family. ATF subfamily. | ATF4. | 0.926 |
ATF2 | CREB1 | ENSGALP00000032623 | ENSGALP00000013824 | Cyclic AMP-dependent transcription factor ATF-2; Transcriptional activator which regulates the transcription of various genes, including those involved in anti-apoptosis, cell growth, and DNA damage response. Dependent on its binding partner, binds to CRE (cAMP response element) consensus sequences (5'-TGACGTCA- 3') or to AP-1 (activator protein 1) consensus sequences (5'-TGACTCA- 3') (By similarity); Belongs to the bZIP family. ATF subfamily. | cAMP response element-binding protein. | 0.962 |
ATF2 | CREB3 | ENSGALP00000032623 | ENSGALP00000003967 | Cyclic AMP-dependent transcription factor ATF-2; Transcriptional activator which regulates the transcription of various genes, including those involved in anti-apoptosis, cell growth, and DNA damage response. Dependent on its binding partner, binds to CRE (cAMP response element) consensus sequences (5'-TGACGTCA- 3') or to AP-1 (activator protein 1) consensus sequences (5'-TGACTCA- 3') (By similarity); Belongs to the bZIP family. ATF subfamily. | cAMP responsive element binding protein 3. | 0.906 |
ATF2 | CREB5 | ENSGALP00000032623 | ENSGALP00000058159 | Cyclic AMP-dependent transcription factor ATF-2; Transcriptional activator which regulates the transcription of various genes, including those involved in anti-apoptosis, cell growth, and DNA damage response. Dependent on its binding partner, binds to CRE (cAMP response element) consensus sequences (5'-TGACGTCA- 3') or to AP-1 (activator protein 1) consensus sequences (5'-TGACTCA- 3') (By similarity); Belongs to the bZIP family. ATF subfamily. | cAMP responsive element binding protein 5. | 0.939 |
ATF2 | CREM | ENSGALP00000032623 | ENSGALP00000069427 | Cyclic AMP-dependent transcription factor ATF-2; Transcriptional activator which regulates the transcription of various genes, including those involved in anti-apoptosis, cell growth, and DNA damage response. Dependent on its binding partner, binds to CRE (cAMP response element) consensus sequences (5'-TGACGTCA- 3') or to AP-1 (activator protein 1) consensus sequences (5'-TGACTCA- 3') (By similarity); Belongs to the bZIP family. ATF subfamily. | Uncharacterized protein. | 0.910 |
ATF4 | ATF2 | ENSGALP00000037099 | ENSGALP00000032623 | ATF4. | Cyclic AMP-dependent transcription factor ATF-2; Transcriptional activator which regulates the transcription of various genes, including those involved in anti-apoptosis, cell growth, and DNA damage response. Dependent on its binding partner, binds to CRE (cAMP response element) consensus sequences (5'-TGACGTCA- 3') or to AP-1 (activator protein 1) consensus sequences (5'-TGACTCA- 3') (By similarity); Belongs to the bZIP family. ATF subfamily. | 0.926 |
ATF4 | ATF6 | ENSGALP00000037099 | ENSGALP00000043808 | ATF4. | Activating transcription factor 6. | 0.938 |
ATF4 | CREB1 | ENSGALP00000037099 | ENSGALP00000013824 | ATF4. | cAMP response element-binding protein. | 0.939 |
ATF4 | CREB3 | ENSGALP00000037099 | ENSGALP00000003967 | ATF4. | cAMP responsive element binding protein 3. | 0.932 |
ATF4 | CREB5 | ENSGALP00000037099 | ENSGALP00000058159 | ATF4. | cAMP responsive element binding protein 5. | 0.926 |
ATF4 | CREM | ENSGALP00000037099 | ENSGALP00000069427 | ATF4. | Uncharacterized protein. | 0.928 |
ATF4 | DDIT3 | ENSGALP00000037099 | ENSGALP00000048552 | ATF4. | C/EBP-like protein. | 0.982 |
ATF4 | EIF2AK3 | ENSGALP00000037099 | ENSGALP00000025668 | ATF4. | Eukaryotic translation initiation factor 2 alpha kinase 3. | 0.961 |
ATF4 | EIF2S1 | ENSGALP00000037099 | ENSGALP00000047783 | ATF4. | Eukaryotic translation initiation factor 2 subunit 1; Functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S pre- initiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF- 2 must exchange with GTP by way of a reaction catalyzed [...] | 0.984 |
ATF4 | XBP1 | ENSGALP00000037099 | ENSGALP00000009296 | ATF4. | BZIP domain-containing protein. | 0.954 |
ATF6 | ATF4 | ENSGALP00000043808 | ENSGALP00000037099 | Activating transcription factor 6. | ATF4. | 0.938 |
ATF6 | CREB3 | ENSGALP00000043808 | ENSGALP00000003967 | Activating transcription factor 6. | cAMP responsive element binding protein 3. | 0.504 |
ATF6 | DDIT3 | ENSGALP00000043808 | ENSGALP00000048552 | Activating transcription factor 6. | C/EBP-like protein. | 0.970 |
ATF6 | EIF2AK3 | ENSGALP00000043808 | ENSGALP00000025668 | Activating transcription factor 6. | Eukaryotic translation initiation factor 2 alpha kinase 3. | 0.741 |
ATF6 | EIF2S1 | ENSGALP00000043808 | ENSGALP00000047783 | Activating transcription factor 6. | Eukaryotic translation initiation factor 2 subunit 1; Functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S pre- initiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF- 2 must exchange with GTP by way of a reaction catalyzed [...] | 0.852 |
page 1 of 4