STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPDLHeterogeneous nuclear ribonucleoprotein D-like; Acts as a transcriptional regulator. Binds DNA and RNA (By similarity). (301 aa)    
Predicted Functional Partners:
HNRNPH3
Uncharacterized protein.
   
 
 0.857
HNRNPH2
Heterogeneous nuclear ribonucleoprotein H1-like protein.
   
 
 0.805
FAM98A
Uncharacterized protein.
   
  
 0.772
FAM98B
Family with sequence similarity 98 member B.
    
 
 0.766
DHX15
Uncharacterized protein.
   
 
 0.762
DHX57
Helicase C-terminal domain-containing protein.
   
 
 0.736
LSM12
Protein LSM12 homolog; Belongs to the LSM12 family.
   
 
 0.719
SRSF2
Serine/arginine-rich splicing factor 2; Necessary for the splicing of pre-mRNA. It is required for formation of the earliest ATP-dependent splicing complex and interacts with spliceosomal components bound to both the 5'- and 3'-splice sites during spliceosome assembly. It also is required for ATP-dependent interactions of both U1 and U2 snRNPs with pre-mRNA.
  
 
 0.712
ELAVL1
ELAV-like protein; Belongs to the RRM elav family.
  
 
0.707
ATXN2
Ataxin 2.
   
 
 0.705
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
Server load: medium (78%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.