STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALOX5APUncharacterized protein. (161 aa)    
Predicted Functional Partners:
LTA4H
Leukotriene A(4) hydrolase; Belongs to the peptidase M1 family.
   
  
 0.679
FUNDC2
FUN14 domain containing 2.
   
  
 0.669
LTC4S
Uncharacterized protein.
   
0.638
ALOX5
Arachidonate 5-lipoxygenase.
   
 
 0.632
LTC4SL
Uncharacterized protein.
   
0.631
TUFT1
Tuftelin 1.
      
 0.619
GAL3ST1
Galactose-3-O-sulfotransferase 1.
      
 0.601
USPL1
USP domain-containing protein.
 
    
 0.573
CST7
Cystatin domain-containing protein.
   
  
 0.546
MGST1
Uncharacterized protein.
   
  
 0.538
Your Current Organism:
Gallus gallus
NCBI taxonomy Id: 9031
Other names: G. gallus, Gallus domesticus, Gallus gallus domesticus, bantam, chicken, chickens, dwarf Leghorn chickens, red junglefowl
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