STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADT87527.1NADH dehydrogenase; COG1252. (429 aa)    
Predicted Functional Partners:
ADT88269.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COG1252.
  
  
 
0.927
ADT87204.1
Hydrogenase 3 maturation protease; COG0680.
    
 
 0.678
ADT87205.1
Formate hydrogenlyase maturation protein HycH; No COG; pfam07450.
    
 
 0.678
sbcD
Exonuclease SbcD, hypothetical; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
    
  0.647
ADT87207.1
Hydrogenase 4 Fe-S subunit; COG1143.
   
 
 0.599
ADT89352.1
Sulfate permease family protein; COG0659.
   
 0.588
ADT86481.1
Sulfate permease family protein; COG2233; COG0659.
   
 0.587
ADT89273.1
Sulfate permease family protein; COG1366; COG0659.
   
 0.587
ADT88061.1
Ubiquinol--cytochrome c reductase, cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 
 0.586
atpG
F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
  
 
 0.582
Your Current Organism:
Vibrio furnissii
NCBI taxonomy Id: 903510
Other names: V. furnissii NCTC 11218, Vibrio furnissii NCTC 11218, Vibrio furnissii str. NCTC 11218, Vibrio furnissii strain NCTC 11218
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.