L1IWS0_GUITC protein (Guillardia theta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

L1IWS0_GUITC

Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (261 aa)

Predicted Functional Partners:

L1JPZ9_GUITC

0.708

L1JX08_GUITC

0.708

L1IAI8_GUITC

0.608

L1I6G5_GUITC

0.590

L1IW98_GUITC

0.590

L1J529_GUITC

0.590

L1JJN4_GUITC

0.590

L1JQ13_GUITC

0.590

L1K3I2_GUITC

0.590

L1JQB0_GUITC

0.556

Your Current Organism:

Guillardia theta

NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
L1I6G5_GUITC	L1IAI8_GUITC	L1I6G5	L1IAI8	AMPK1_CBM domain-containing protein.	Raptor_N domain-containing protein.	0.577
L1I6G5_GUITC	L1IWS0_GUITC	L1I6G5	L1IWS0	AMPK1_CBM domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.590
L1I6G5_GUITC	L1JPZ9_GUITC	L1I6G5	L1JPZ9	AMPK1_CBM domain-containing protein.	Uncharacterized protein.	0.814
L1I6G5_GUITC	L1JQB0_GUITC	L1I6G5	L1JQB0	AMPK1_CBM domain-containing protein.	Uncharacterized protein.	0.453
L1I6G5_GUITC	L1JX08_GUITC	L1I6G5	L1JX08	AMPK1_CBM domain-containing protein.	Uncharacterized protein.	0.814
L1IAI8_GUITC	L1I6G5_GUITC	L1IAI8	L1I6G5	Raptor_N domain-containing protein.	AMPK1_CBM domain-containing protein.	0.577
L1IAI8_GUITC	L1IW98_GUITC	L1IAI8	L1IW98	Raptor_N domain-containing protein.	AMPK1_CBM domain-containing protein.	0.577
L1IAI8_GUITC	L1IWS0_GUITC	L1IAI8	L1IWS0	Raptor_N domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.608
L1IAI8_GUITC	L1J529_GUITC	L1IAI8	L1J529	Raptor_N domain-containing protein.	AMPK1_CBM domain-containing protein.	0.577
L1IAI8_GUITC	L1JJN4_GUITC	L1IAI8	L1JJN4	Raptor_N domain-containing protein.	AMPK1_CBM domain-containing protein.	0.577
L1IAI8_GUITC	L1JPZ9_GUITC	L1IAI8	L1JPZ9	Raptor_N domain-containing protein.	Uncharacterized protein.	0.678
L1IAI8_GUITC	L1JQ13_GUITC	L1IAI8	L1JQ13	Raptor_N domain-containing protein.	AMPKBI domain-containing protein.	0.577
L1IAI8_GUITC	L1JX08_GUITC	L1IAI8	L1JX08	Raptor_N domain-containing protein.	Uncharacterized protein.	0.678
L1IAI8_GUITC	L1K3I2_GUITC	L1IAI8	L1K3I2	Raptor_N domain-containing protein.	AMPK1_CBM domain-containing protein.	0.577
L1IW98_GUITC	L1IAI8_GUITC	L1IW98	L1IAI8	AMPK1_CBM domain-containing protein.	Raptor_N domain-containing protein.	0.577
L1IW98_GUITC	L1IWS0_GUITC	L1IW98	L1IWS0	AMPK1_CBM domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.590
L1IW98_GUITC	L1JPZ9_GUITC	L1IW98	L1JPZ9	AMPK1_CBM domain-containing protein.	Uncharacterized protein.	0.814
L1IW98_GUITC	L1JQB0_GUITC	L1IW98	L1JQB0	AMPK1_CBM domain-containing protein.	Uncharacterized protein.	0.453
L1IW98_GUITC	L1JX08_GUITC	L1IW98	L1JX08	AMPK1_CBM domain-containing protein.	Uncharacterized protein.	0.814
L1IWS0_GUITC	L1I6G5_GUITC	L1IWS0	L1I6G5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	AMPK1_CBM domain-containing protein.	0.590