STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1J4K8_GUITCSmr domain-containing protein. (900 aa)    
Predicted Functional Partners:
L1IWU4_GUITC
IGPS domain-containing protein.
      
 0.651
L1J699_GUITC
IGPS domain-containing protein.
      
 0.651
L1K0T7_GUITC
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
   0.543
L1ITK5_GUITC
Uncharacterized protein.
 
  
 0.514
L1JBM1_GUITC
S4 RNA-binding domain-containing protein.
    
   0.513
RPS9e
Small subunit ribosomal protein S9e, cytoplasmic.
    
   0.513
L1JDA4_GUITC
Glutamine amidotransferase type-1 domain-containing protein; Belongs to the HisA/HisF family.
     
 0.503
L1JCL2_GUITC
UVRC domain-containing protein.
     
 0.499
L1IPF9_GUITC
Uncharacterized protein.
   
   0.497
L1JBF0_GUITC
Uncharacterized protein.
   
 
 0.493
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
Server load: low (14%) [HD]