STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1JNP1_GUITCRRM domain-containing protein. (358 aa)    
Predicted Functional Partners:
UBQ_RPS30e
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.696
L1J5W1_GUITC
Nuclear cap-binding protein subunit 2.
    
 0.661
L1IJA4_GUITC
Uncharacterized protein.
    
 0.658
L1ICL0_GUITC
Matrin-type domain-containing protein.
    
 0.657
L1JBG9_GUITC
RRM domain-containing protein.
    
 0.639
L1J233_GUITC
Translation initiation factor 2, gamma subunit.
   
 0.628
L1JZ56_GUITC
Translation initiation factor 2, alpha subunit.
   
 0.620
L1IPZ1_GUITC
KH domain-containing protein.
   
 0.611
L1JKX9_GUITC
HTH OST-type domain-containing protein.
    
 0.602
L1J4S2_GUITC
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.596
Your Current Organism:
Guillardia theta
NCBI taxonomy Id: 905079
Other names: G. theta CCMP2712, Guillardia theta CCMP2712
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.