KCNK17 protein (Phasianus colchicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KCNK17

Potassium two pore domain channel subfamily K member 17. (318 aa)

Predicted Functional Partners:

KCNK18

0.609

KCNK16

0.608

KCNK1

0.602

ENSPCLP00000021113

0.601

KCTD18

0.569

KCNMB1

0.562

KCNAB1

0.562

KCNC2

0.553

SLC10A2

0.543

KCNK15

0.534

Your Current Organism:

Phasianus colchicus

NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPCLP00000021113	KCNK1	ENSPCLP00000021113	ENSPCLP00000000546	annotation not available	Potassium two pore domain channel subfamily K member 1.	0.536
ENSPCLP00000021113	KCNK15	ENSPCLP00000021113	ENSPCLP00000000493	annotation not available	Potassium two pore domain channel subfamily K member 15.	0.410
ENSPCLP00000021113	KCNK17	ENSPCLP00000021113	ENSPCLP00000001600	annotation not available	Potassium two pore domain channel subfamily K member 17.	0.601
ENSPCLP00000021113	KCNK18	ENSPCLP00000021113	ENSPCLP00000010603	annotation not available	Potassium two pore domain channel subfamily K member 18.	0.515
KCNAB1	KCNC2	ENSPCLP00000013400	ENSPCLP00000003159	Potassium voltage-gated channel subfamily A member regulatory beta subunit 1.	Potassium voltage-gated channel subfamily C member 2.	0.703
KCNAB1	KCNK17	ENSPCLP00000013400	ENSPCLP00000001600	Potassium voltage-gated channel subfamily A member regulatory beta subunit 1.	Potassium two pore domain channel subfamily K member 17.	0.562
KCNC2	KCNAB1	ENSPCLP00000003159	ENSPCLP00000013400	Potassium voltage-gated channel subfamily C member 2.	Potassium voltage-gated channel subfamily A member regulatory beta subunit 1.	0.703
KCNC2	KCNK17	ENSPCLP00000003159	ENSPCLP00000001600	Potassium voltage-gated channel subfamily C member 2.	Potassium two pore domain channel subfamily K member 17.	0.553
KCNK1	ENSPCLP00000021113	ENSPCLP00000000546	ENSPCLP00000021113	Potassium two pore domain channel subfamily K member 1.	annotation not available	0.536
KCNK1	KCNK15	ENSPCLP00000000546	ENSPCLP00000000493	Potassium two pore domain channel subfamily K member 1.	Potassium two pore domain channel subfamily K member 15.	0.552
KCNK1	KCNK16	ENSPCLP00000000546	ENSPCLP00000001601	Potassium two pore domain channel subfamily K member 1.	Potassium two pore domain channel subfamily K member 16.	0.536
KCNK1	KCNK17	ENSPCLP00000000546	ENSPCLP00000001600	Potassium two pore domain channel subfamily K member 1.	Potassium two pore domain channel subfamily K member 17.	0.602
KCNK1	KCNK18	ENSPCLP00000000546	ENSPCLP00000010603	Potassium two pore domain channel subfamily K member 1.	Potassium two pore domain channel subfamily K member 18.	0.702
KCNK15	ENSPCLP00000021113	ENSPCLP00000000493	ENSPCLP00000021113	Potassium two pore domain channel subfamily K member 15.	annotation not available	0.410
KCNK15	KCNK1	ENSPCLP00000000493	ENSPCLP00000000546	Potassium two pore domain channel subfamily K member 15.	Potassium two pore domain channel subfamily K member 1.	0.552
KCNK15	KCNK16	ENSPCLP00000000493	ENSPCLP00000001601	Potassium two pore domain channel subfamily K member 15.	Potassium two pore domain channel subfamily K member 16.	0.410
KCNK15	KCNK17	ENSPCLP00000000493	ENSPCLP00000001600	Potassium two pore domain channel subfamily K member 15.	Potassium two pore domain channel subfamily K member 17.	0.534
KCNK15	KCNK18	ENSPCLP00000000493	ENSPCLP00000010603	Potassium two pore domain channel subfamily K member 15.	Potassium two pore domain channel subfamily K member 18.	0.590
KCNK16	KCNK1	ENSPCLP00000001601	ENSPCLP00000000546	Potassium two pore domain channel subfamily K member 16.	Potassium two pore domain channel subfamily K member 1.	0.536
KCNK16	KCNK15	ENSPCLP00000001601	ENSPCLP00000000493	Potassium two pore domain channel subfamily K member 16.	Potassium two pore domain channel subfamily K member 15.	0.410