STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIT4Bifunctional nitrilase/nitrile hydratase NIT4. (351 aa)    
Predicted Functional Partners:
CYSC1
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
  0.915
GGT1
Gamma-glutamyltranspeptidase 1.
  
 
 0.907
GGT3
Gamma-glutamyltranspeptidase 3.
  
 
 0.907
MA16_Dca009135
Isoaspartyl peptidase/L-asparaginase.
  
 
  0.902
GAD1
Glutamate decarboxylase 1.
    
 0.814
MA16_Dca005740
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
    
 0.814
GAD1-2
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
    
 0.814
AIH
Agmatine deiminase.
  
 
 0.717
MA16_Dca012998
Nicotinamide mononucleotide adenylyltransferase.
  
 
 0.699
MA16_Dca024686
Alanine--glyoxylate aminotransferase 2 like 3, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.607
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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