STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca012220Uncharacterized protein. (329 aa)    
Predicted Functional Partners:
MA16_Dca005194
Thylakoid lumenal protein.
  
    0.548
MA16_Dca012423
Uncharacterized protein.
  
 
  0.518
MA16_Dca000912
Uncharacterized protein.
  
    0.515
MA16_Dca002367
Uncharacterized protein.
  
  0.514
PSBO
Oxygen-evolving enhancer protein 1, chloroplastic.
  
    0.510
MA16_Dca000654
DUF1279 domain-containing protein.
  
    0.499
MA16_Dca022921
Thylakoid lumenal 15.0 kDa protein 2, chloroplastic.
  
    0.472
CSP41A
Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic.
  
  0.442
TIC20-V
Protein TIC 20-v, chloroplastic.
  
     0.441
PAP12
Putative plastid-lipid-associated protein 12, chloroplastic.
  
    0.436
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.