STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MA16_Dca006991Uncharacterized protein. (142 aa)    
Predicted Functional Partners:
MGS1-4
Pollen-specific protein C13.
      
 0.538
MA16_Dca028804
Uncharacterized protein.
      
 0.533
MA16_Dca021239
Pistil-specific extensin-like protein.
      
 0.441
MA16_Dca026078
E3 ubiquitin-protein ligase.
      
 0.426
MGS1-6
Pollen-specific protein C13.
      
 0.424
MA16_Dca004381
Pistil-specific extensin-like protein.
      
 0.410
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.