STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMT-4Homocysteine S-methyltransferase 4. (74 aa)    
Predicted Functional Partners:
MA16_Dca011090
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 
 0.850
ISPH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic.
  
 
 0.850
METE
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase.
  
 
 0.831
METE-2
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase.
  
 
 0.831
MA16_Dca011942
Formate--tetrahydrofolate ligase.
  
 
 0.787
MA16_Dca003332
Cystathionine beta-lyase, chloroplastic.
  
 
 0.781
GDCSP
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.780
CGS1
Cystathionine gamma-synthase, chloroplastic.
  
 
 0.762
MGL
Methionine gamma-lyase.
  
 
 0.751
MGL-2
Methionine gamma-lyase.
  
 
 0.751
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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