STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HO2Putative inactive heme oxygenase 2, chloroplastic. (268 aa)    
Predicted Functional Partners:
HEMH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.932
HEMH-2
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.932
HY2
Phytochromobilin:ferredoxin oxidoreductase, chloroplastic.
     
 0.924
FH
Frataxin, mitochondrial.
     
 0.923
HO1-2
Heme oxygenase 1, chloroplastic.
  
  
 
0.904
MA16_Dca025370
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
      
 0.511
MA16_Dca029116
Alpha-glucosidase.
      
 0.511
MA16_Dca016396
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
      
 0.511
MA16_Dca016951
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
      
 0.511
MA16_Dca021319
Putative alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
      
 0.511
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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